STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A1S_1182Cyclic AMP receptor protein. (190 aa)    
Predicted Functional Partners:
A1S_1067
GGDEF.
   
 0.974
A1S_2706
Sigma D (sigma 70) factor of RNA polymerase major sigma factor during exponential growth.
    
 
 0.967
A1S_0287
RNA polymerase subunit B.
    
 
 0.963
A1S_3056
RNA polymerase alpha subunit.
   
   0.962
A1S_0288
Transcriptase beta' chain; RNA polymerase beta' subunit.
    
 
 0.961
A1S_3171
RNA polymerase omega subunit.
    
 
 0.958
A1S_1479
Hypothetical protein.
  
  
0.902
A1S_3185
Glutamate synthase large chain precursor.
    
 0.871
A1S_1528
Hypothetical protein.
     
 0.846
A1S_1626
Putative adenylate or guanylate cyclase.
 
 0.822
Your Current Organism:
Acinetobacter baumannii ATCC 17978
NCBI taxonomy Id: 400667
Other names: A. baumannii ATCC 17978, Acinetobacter baumannii str. ATCC 17978, Acinetobacter baumannii strain ATCC 17978
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.