STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A1S_12373-Deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) phosphatase. (179 aa)    
Predicted Functional Partners:
A1S_1236
D-arabinose 5-phosphate isomerase.
 
 0.998
A1S_1899
2-dehydro-3-deoxyphosphooctonate aldolase.
  
 0.992
A1S_1557
3-deoxy-manno-octulosonate cytidylyltransferase.
 
  
 0.984
A1S_1240
Putative transport protein; ABC superfamily atp_bind.
 
  
 0.909
A1S_1238
Hypothetical protein.
  
  
 0.905
A1S_1239
Putative transport protein; ABC superfamily peri_bind.
  
    0.837
A1S_1235
cysteinyl-tRNA synthetase.
       0.734
A1S_1556
Lipid A 4'-kinase.
 
   
 0.710
A1S_3313
3-deoxy-D-manno-2-octulosonate transferase.
 
  
 0.703
A1S_1967
Hypothetical protein.
 
  
 0.660
Your Current Organism:
Acinetobacter baumannii ATCC 17978
NCBI taxonomy Id: 400667
Other names: A. baumannii ATCC 17978, Acinetobacter baumannii str. ATCC 17978, Acinetobacter baumannii strain ATCC 17978
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.