Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A1S_0351 | A1S_0878 | Hypothetical protein. | Hypothetical protein. | 0.433 |
A1S_0351 | A1S_1636 | Hypothetical protein. | Putative poly(hydroxyalcanoate) granule associated protein. | 0.676 |
A1S_0351 | A1S_2703 | Hypothetical protein. | Hypothetical protein. | 0.631 |
A1S_0450 | A1S_0878 | Putative transcriptional regulator (TetR-family). | Hypothetical protein. | 0.465 |
A1S_0450 | A1S_1636 | Putative transcriptional regulator (TetR-family). | Putative poly(hydroxyalcanoate) granule associated protein. | 0.662 |
A1S_0450 | A1S_2703 | Putative transcriptional regulator (TetR-family). | Hypothetical protein. | 0.458 |
A1S_0812 | A1S_1636 | Hypothetical protein. | Putative poly(hydroxyalcanoate) granule associated protein. | 0.725 |
A1S_0878 | A1S_0351 | Hypothetical protein. | Hypothetical protein. | 0.433 |
A1S_0878 | A1S_0450 | Hypothetical protein. | Putative transcriptional regulator (TetR-family). | 0.465 |
A1S_0878 | A1S_1636 | Hypothetical protein. | Putative poly(hydroxyalcanoate) granule associated protein. | 0.669 |
A1S_0878 | A1S_2703 | Hypothetical protein. | Hypothetical protein. | 0.753 |
A1S_1635 | A1S_1636 | Putative membrane protein. | Putative poly(hydroxyalcanoate) granule associated protein. | 0.736 |
A1S_1635 | A1S_1637 | Putative membrane protein. | DNA-binding protein HU-beta. | 0.647 |
A1S_1636 | A1S_0351 | Putative poly(hydroxyalcanoate) granule associated protein. | Hypothetical protein. | 0.676 |
A1S_1636 | A1S_0450 | Putative poly(hydroxyalcanoate) granule associated protein. | Putative transcriptional regulator (TetR-family). | 0.662 |
A1S_1636 | A1S_0812 | Putative poly(hydroxyalcanoate) granule associated protein. | Hypothetical protein. | 0.725 |
A1S_1636 | A1S_0878 | Putative poly(hydroxyalcanoate) granule associated protein. | Hypothetical protein. | 0.669 |
A1S_1636 | A1S_1635 | Putative poly(hydroxyalcanoate) granule associated protein. | Putative membrane protein. | 0.736 |
A1S_1636 | A1S_1637 | Putative poly(hydroxyalcanoate) granule associated protein. | DNA-binding protein HU-beta. | 0.723 |
A1S_1636 | A1S_2260 | Putative poly(hydroxyalcanoate) granule associated protein. | ATP-dependent RNA helicase (DEAD box). | 0.642 |
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