Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A1S_0426 | A1S_0452 | Hypothetical protein. | Hypothetical protein. | 0.753 |
A1S_0426 | A1S_0490 | Hypothetical protein. | Putative hydrolase. | 0.569 |
A1S_0426 | A1S_1053 | Hypothetical protein. | Hypothetical protein. | 0.795 |
A1S_0426 | A1S_1639 | Hypothetical protein. | Peptidyl-prolyl cis-trans isomerase precursor; PPIase; rotamase. | 0.731 |
A1S_0426 | A1S_1768 | Hypothetical protein. | Hypothetical protein. | 0.691 |
A1S_0426 | A1S_1923 | Hypothetical protein. | Putative membrane protein. | 0.716 |
A1S_0426 | A1S_2143 | Hypothetical protein. | Putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase. | 0.757 |
A1S_0426 | A1S_2753 | Hypothetical protein. | Putative protein (DcaP-like). | 0.676 |
A1S_0426 | A1S_2866 | Hypothetical protein. | Hypothetical protein. | 0.768 |
A1S_0426 | A1S_3317 | Hypothetical protein. | Putative outer membrane protein. | 0.722 |
A1S_0452 | A1S_0426 | Hypothetical protein. | Hypothetical protein. | 0.753 |
A1S_0452 | A1S_0490 | Hypothetical protein. | Putative hydrolase. | 0.605 |
A1S_0452 | A1S_1053 | Hypothetical protein. | Hypothetical protein. | 0.758 |
A1S_0452 | A1S_1639 | Hypothetical protein. | Peptidyl-prolyl cis-trans isomerase precursor; PPIase; rotamase. | 0.564 |
A1S_0452 | A1S_1768 | Hypothetical protein. | Hypothetical protein. | 0.714 |
A1S_0452 | A1S_1923 | Hypothetical protein. | Putative membrane protein. | 0.705 |
A1S_0452 | A1S_2143 | Hypothetical protein. | Putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase. | 0.749 |
A1S_0452 | A1S_2753 | Hypothetical protein. | Putative protein (DcaP-like). | 0.554 |
A1S_0452 | A1S_2866 | Hypothetical protein. | Hypothetical protein. | 0.743 |
A1S_0452 | A1S_3317 | Hypothetical protein. | Putative outer membrane protein. | 0.717 |
page 1 of 6