Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A1S_2000Hypothetical protein. (757 aa)    
Predicted Functional Partners:
A1S_1995
Molybdopterin biosynthesis protein.
 
 
 0.838
A1S_1996
Hypothetical protein.
 
  
 0.787
A1S_2002
Nitrate reductase large subunit.
 
 
0.769
A1S_1999
Molybdopterin biosynthesis protein A.
 
  
 0.758
A1S_2639
Formate dehydrogenase formation protein.
 
 
 0.750
A1S_2640
Putative oxidoreductase molybdopterin.
  
  
 0.741
A1S_0480
Fumarate hydratase.
   
 
 0.727
A1S_2003
Putative nitrate reductase.
 
 
 0.708
A1S_0279
Protein chain elongation factor EF-Tu.
   
 
 0.652
A1S_0869
Protein chain elongation factor EF-Tu.
   
 
 0.652
Your Current Organism:
Acinetobacter baumannii ATCC 17978
NCBI taxonomy Id: 400667
Other names: A. baumannii ATCC 17978, Acinetobacter baumannii str. ATCC 17978, Acinetobacter baumannii strain ATCC 17978
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