Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A1S_0612 | A1S_0747 | DNA polymerase I. | Ribonucleoside diphosphate reductase alpha subunit. | 0.808 |
A1S_0612 | A1S_2056 | DNA polymerase I. | DNA polymerase III tau and gamma subunits (DNA elongation factor III). | 0.573 |
A1S_0612 | A1S_2057 | DNA polymerase I. | Methyl viologen resistance protein (MFS superfamily). | 0.614 |
A1S_0747 | A1S_0612 | Ribonucleoside diphosphate reductase alpha subunit. | DNA polymerase I. | 0.808 |
A1S_0747 | A1S_2057 | Ribonucleoside diphosphate reductase alpha subunit. | Methyl viologen resistance protein (MFS superfamily). | 0.438 |
A1S_1740 | A1S_2057 | Benzoate transport. | Methyl viologen resistance protein (MFS superfamily). | 0.507 |
A1S_1740 | A1S_3146 | Benzoate transport. | Multidrug efflux transport protein. | 0.495 |
A1S_1799 | A1S_2057 | Multidrug efflux MFS transporter putative. | Methyl viologen resistance protein (MFS superfamily). | 0.606 |
A1S_2056 | A1S_0612 | DNA polymerase III tau and gamma subunits (DNA elongation factor III). | DNA polymerase I. | 0.573 |
A1S_2056 | A1S_2057 | DNA polymerase III tau and gamma subunits (DNA elongation factor III). | Methyl viologen resistance protein (MFS superfamily). | 0.484 |
A1S_2057 | A1S_0612 | Methyl viologen resistance protein (MFS superfamily). | DNA polymerase I. | 0.614 |
A1S_2057 | A1S_0747 | Methyl viologen resistance protein (MFS superfamily). | Ribonucleoside diphosphate reductase alpha subunit. | 0.438 |
A1S_2057 | A1S_1740 | Methyl viologen resistance protein (MFS superfamily). | Benzoate transport. | 0.507 |
A1S_2057 | A1S_1799 | Methyl viologen resistance protein (MFS superfamily). | Multidrug efflux MFS transporter putative. | 0.606 |
A1S_2057 | A1S_2056 | Methyl viologen resistance protein (MFS superfamily). | DNA polymerase III tau and gamma subunits (DNA elongation factor III). | 0.484 |
A1S_2057 | A1S_2058 | Methyl viologen resistance protein (MFS superfamily). | Putative transcriptional regulator. | 0.672 |
A1S_2057 | A1S_2846 | Methyl viologen resistance protein (MFS superfamily). | CysI-like sulfite reductase protein. | 0.437 |
A1S_2057 | A1S_3146 | Methyl viologen resistance protein (MFS superfamily). | Multidrug efflux transport protein. | 0.408 |
A1S_2058 | A1S_2057 | Putative transcriptional regulator. | Methyl viologen resistance protein (MFS superfamily). | 0.672 |
A1S_2846 | A1S_2057 | CysI-like sulfite reductase protein. | Methyl viologen resistance protein (MFS superfamily). | 0.437 |
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