STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A1S_2475Isocitrate dehydrogenase. (418 aa)    
Predicted Functional Partners:
A1S_0558
Aconitate hydratase 1.
 
 0.992
A1S_2715
2-oxoglutarate decarboxylase component of the 2-oxoglutarate dehydrogenase complex (E1).
   
 
 0.990
A1S_0480
Fumarate hydratase.
  
  
 0.966
A1S_3025
Malate dehydrogenase.
  
 
 0.949
A1S_2477
Isocitrate dehydrogenase.
    
 0.946
A1S_3185
Glutamate synthase large chain precursor.
    
 0.942
A1S_2710
Hypothetical protein.
  
 
 0.940
A1S_1026
Glutamate dehydrogenase.
   
 0.921
A1S_3134
Glutamate dehydrogenase (NAD(P)+) oxidoreductase protein.
   
 0.921
A1S_2718
succinyl-CoA synthetase beta chain.
  
  
 0.919
Your Current Organism:
Acinetobacter baumannii ATCC 17978
NCBI taxonomy Id: 400667
Other names: A. baumannii ATCC 17978, Acinetobacter baumannii str. ATCC 17978, Acinetobacter baumannii strain ATCC 17978
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.