Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A1S_0179 | A1S_0843 | NADPH-dependent FMN reductase. | Putative flavodoxin or tryptophan repressor binding protein. | 0.545 |
A1S_0179 | A1S_2700 | NADPH-dependent FMN reductase. | Putative flavodoxin or tryptophan repressor binding protein. | 0.873 |
A1S_0179 | A1S_2772 | NADPH-dependent FMN reductase. | NAD(P)H dehydrogenase quinone family. | 0.866 |
A1S_0179 | A1S_3036 | NADPH-dependent FMN reductase. | Tryptophan repressor binding protein. | 0.884 |
A1S_0843 | A1S_0179 | Putative flavodoxin or tryptophan repressor binding protein. | NADPH-dependent FMN reductase. | 0.545 |
A1S_0843 | A1S_2700 | Putative flavodoxin or tryptophan repressor binding protein. | Putative flavodoxin or tryptophan repressor binding protein. | 0.940 |
A1S_0843 | A1S_2772 | Putative flavodoxin or tryptophan repressor binding protein. | NAD(P)H dehydrogenase quinone family. | 0.943 |
A1S_0843 | A1S_3036 | Putative flavodoxin or tryptophan repressor binding protein. | Tryptophan repressor binding protein. | 0.950 |
A1S_1393 | A1S_2700 | Putative two-component sensor kinase. | Putative flavodoxin or tryptophan repressor binding protein. | 0.405 |
A1S_2699 | A1S_2700 | Putative transcriptional regulator. | Putative flavodoxin or tryptophan repressor binding protein. | 0.638 |
A1S_2700 | A1S_0179 | Putative flavodoxin or tryptophan repressor binding protein. | NADPH-dependent FMN reductase. | 0.873 |
A1S_2700 | A1S_0843 | Putative flavodoxin or tryptophan repressor binding protein. | Putative flavodoxin or tryptophan repressor binding protein. | 0.940 |
A1S_2700 | A1S_1393 | Putative flavodoxin or tryptophan repressor binding protein. | Putative two-component sensor kinase. | 0.405 |
A1S_2700 | A1S_2699 | Putative flavodoxin or tryptophan repressor binding protein. | Putative transcriptional regulator. | 0.638 |
A1S_2700 | A1S_2772 | Putative flavodoxin or tryptophan repressor binding protein. | NAD(P)H dehydrogenase quinone family. | 0.935 |
A1S_2700 | A1S_3036 | Putative flavodoxin or tryptophan repressor binding protein. | Tryptophan repressor binding protein. | 0.950 |
A1S_2772 | A1S_0179 | NAD(P)H dehydrogenase quinone family. | NADPH-dependent FMN reductase. | 0.866 |
A1S_2772 | A1S_0843 | NAD(P)H dehydrogenase quinone family. | Putative flavodoxin or tryptophan repressor binding protein. | 0.943 |
A1S_2772 | A1S_2700 | NAD(P)H dehydrogenase quinone family. | Putative flavodoxin or tryptophan repressor binding protein. | 0.935 |
A1S_2772 | A1S_3036 | NAD(P)H dehydrogenase quinone family. | Tryptophan repressor binding protein. | 0.935 |
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