STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABR69462.1PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: sit:TM1040_3357 TRAP dicarboxylate transporter-DctP subunit. (356 aa)    
Predicted Functional Partners:
ABR69456.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: pat:Patl_2862 tripartite ATP-independent periplasmic transporter, DctQ component.
 
    0.796
ABR69457.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pat:Patl_2863 TRAP dicarboxylate transporter, DctM subunit.
 
    0.781
ABR72843.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rde:RD1_2314 TRAP-type transporter, DctM subunit, putative.
 
    0.767
ABR71213.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: chy:CHY_1303 TRAP dicarboxylate transporter, DctM subunit.
 
    0.739
ABR71214.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: chy:CHY_1302 TRAP dicarboxylate transporter, DctQ subunit.
 
  
 0.737
ABR71695.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: msu:MS0540 hypothetical protein.
 
    0.734
ABR68988.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: csa:Csal_2978 TRAP dicarboxylate transporter-DctM subunit.
 
    0.728
ABR72026.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: bbr:BB3423 putative inner membrane protein.
 
    0.728
ABR71371.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pau:PA14_15180 putative ABC transport system, membrane protein.
 
    0.720
ABR68984.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: mta:Moth_0424 TRAP dicarboxylate transporter-DctM subunit.
 
    0.719
Your Current Organism:
Marinomonas sp. MWYL1
NCBI taxonomy Id: 400668
Other names: M. sp. MWYL1
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