STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABR69775.1PFAM: O-antigen polymerase; KEGG: csa:Csal_1694 O-antigen polymerase. (440 aa)    
Predicted Functional Partners:
ABR69774.1
PFAM: sugar transferase; KEGG: tcx:Tcr_1675 undecaprenyl-phosphate galactosephosphotransferase.
  
  
 0.968
ABR70383.1
PFAM: glycosyl transferase group 1; KEGG: maq:Maqu_0779 glycosyl transferase, group 1.
 
 
 0.936
ABR72381.1
TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; KEGG: csa:Csal_0009 lipopolysaccharide heptosyltransferase II.
  
 
 0.929
ABR72376.1
Three-deoxy-D-manno-octulosonic-acid transferase domain protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
    
 0.919
ABR69753.1
TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; KEGG: maq:Maqu_0794 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
  
  
 0.703
ABR72384.1
PFAM: glycosyl transferase group 1; KEGG: maq:Maqu_0792 transcriptional regulator, fis family.
 
  
 0.646
ABR69778.1
PFAM: glycosyl transferase group 1; KEGG: csa:Csal_1695 glycosyl transferase, group 1.
 
  
 0.590
ABR69746.1
PFAM: sugar transferase; KEGG: ilo:IL0563 sugar transferase.
  
  
 0.572
ABR69280.1
PFAM: Siderophore-interacting protein; KEGG: aci:ACIAD2762 hypothetical protein; putative siderophore-interacting protein.
  
     0.570
ABR69773.1
PFAM: glycosyl transferase family 2; KEGG: eca:ECA1437 O antigen biosynthesis rhamnosyltransferase rfbn.
  
  
 0.547
Your Current Organism:
Marinomonas sp. MWYL1
NCBI taxonomy Id: 400668
Other names: M. sp. MWYL1
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