STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABR72690.1PFAM: polysaccharide deacetylase; KEGG: ilo:IL0251 polysaccharide deacetylase family protein. (354 aa)    
Predicted Functional Partners:
ABR72399.1
SMART: Lysozyme subfamily 2; KEGG: sde:Sde_0400 bax protein, putative.
 
     0.779
ABR72510.1
KEGG: sde:Sde_2088 hypothetical protein.
  
     0.631
ABR72856.1
KEGG: pat:Patl_1777 hypothetical protein.
  
     0.518
kbl
2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
     
 0.513
ABR70627.1
PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase catalytic; MLTD_N domain protein; KEGG: cps:CPS_1998 putative membrane-bound lytic murein transglycosylase.
 
   
 0.511
tdh
L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family.
       0.501
ABR73342.1
PFAM: phosphoesterase PA-phosphatase related; KEGG: sde:Sde_1770 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family-like.
  
  
 0.461
ABR69660.1
PFAM: protein of unknown function DUF610 YibQ; KEGG: abo:ABO_2277 hypothetical protein.
  
     0.434
ABR70731.1
KEGG: pat:Patl_0257 hypothetical protein.
  
     0.426
ABR70497.1
PFAM: protein of unknown function DUF481; KEGG: sde:Sde_0668 putative salt-induced outer membrane protein.
  
     0.401
Your Current Organism:
Marinomonas sp. MWYL1
NCBI taxonomy Id: 400668
Other names: M. sp. MWYL1
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