A0A1X7SEV0 protein (Amphimedon queenslandica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1X7SEV0

ANK_REP_REGION domain-containing protein. (174 aa)

Predicted Functional Partners:

A0A1X7VCS5

0.674

A0A1X7UV19

0.667

A0A1X7VNW1

0.663

A0A1X7TJP4

0.661

A0A1X7VQK5

0.660

A0A1X7VU33

0.659

A0A1X7VB52

0.655

A0A1X7VLU1

0.653

A0A1X7VKK6

0.650

A0A1X7VG44

0.646

Your Current Organism:

Amphimedon queenslandica

NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1X7SEV0	A0A1X7TJP4	ANK_REP_REGION domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.661
A0A1X7SEV0	A0A1X7UV19	ANK_REP_REGION domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.667
A0A1X7SEV0	A0A1X7VB52	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.655
A0A1X7SEV0	A0A1X7VCS5	ANK_REP_REGION domain-containing protein.	VWFA domain-containing protein.	0.674
A0A1X7SEV0	A0A1X7VG44	ANK_REP_REGION domain-containing protein.	PCI domain-containing protein.	0.646
A0A1X7SEV0	A0A1X7VKK6	ANK_REP_REGION domain-containing protein.	MPN domain-containing protein.	0.650
A0A1X7SEV0	A0A1X7VLU1	ANK_REP_REGION domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.653
A0A1X7SEV0	A0A1X7VNW1	ANK_REP_REGION domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.663
A0A1X7SEV0	A0A1X7VQK5	ANK_REP_REGION domain-containing protein.	PCI domain-containing protein.	0.660
A0A1X7SEV0	A0A1X7VU33	ANK_REP_REGION domain-containing protein.	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family.	0.659
A0A1X7TJP4	A0A1X7SEV0	AAA domain-containing protein; Belongs to the AAA ATPase family.	ANK_REP_REGION domain-containing protein.	0.661
A0A1X7TJP4	A0A1X7UV19	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
A0A1X7TJP4	A0A1X7VB52	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.998
A0A1X7TJP4	A0A1X7VCS5	AAA domain-containing protein; Belongs to the AAA ATPase family.	VWFA domain-containing protein.	0.998
A0A1X7TJP4	A0A1X7VG44	AAA domain-containing protein; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.999
A0A1X7TJP4	A0A1X7VKK6	AAA domain-containing protein; Belongs to the AAA ATPase family.	MPN domain-containing protein.	0.999
A0A1X7TJP4	A0A1X7VLU1	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
A0A1X7TJP4	A0A1X7VNW1	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
A0A1X7TJP4	A0A1X7VQK5	AAA domain-containing protein; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.998
A0A1X7TJP4	A0A1X7VU33	AAA domain-containing protein; Belongs to the AAA ATPase family.	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family.	0.998