STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7SFG2Uncharacterized protein. (63 aa)    
Predicted Functional Partners:
A0A1X7UVJ4
Uncharacterized protein.
  
 
 0.599
A0A1X7UNU1
SCP2 domain-containing protein.
  
 0.572
A0A1X7UD97
SAM domain-containing protein.
    
 0.524
A0A1X7SV34
Uncharacterized protein.
  
     0.519
A0A1X7T2N8
Uncharacterized protein.
  
     0.486
A0A1X7VXP1
Uncharacterized protein.
  
 
 0.466
A0A1X7UHE3
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.436
A0A1X7VBG1
Ubiquitin-like domain-containing protein.
    
  0.421
A0A1X7VQB8
Uncharacterized protein.
  
 0.413
A0A1X7UYG1
ETF domain-containing protein.
  
 
  0.400
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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