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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7SL01Uncharacterized protein. (124 aa)    
Predicted Functional Partners:
A0A1X7SV59
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.998
A0A1X7VEE0
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.998
A0A1X7V108
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
  
 0.979
A0A1X7UMC8
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
  
 0.978
A0A1X7UX89
Uncharacterized protein.
  
 0.977
A0A1X7TUG1
Ribosomal_L7Ae domain-containing protein.
   
 0.975
A0A1X7VP63
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.
   
 0.975
A0A1X7TDK5
Ribosomal_L28e domain-containing protein.
   
 0.974
A0A1X7U4N8
Uncharacterized protein.
   
 0.974
A0A1X7TUY3
Uncharacterized protein.
   
 0.972
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.