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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7SL44Uncharacterized protein. (31 aa)    
Predicted Functional Partners:
A0A1X7SFZ6
Uncharacterized protein.
  
     0.499
A0A1X7SJI8
AAA_9 domain-containing protein.
  
     0.473
A0A1X7TG28
Uncharacterized protein.
  
     0.465
A0A1X7THY8
Dynein_AAA_lid domain-containing protein.
  
     0.464
A0A1X7SIV2
Uncharacterized protein.
  
     0.461
A0A1X7THI6
Uncharacterized protein.
  
     0.461
A0A1X7TTB6
Dynein_AAA_lid domain-containing protein.
  
     0.450
A0A1X7TRI7
Uncharacterized protein.
  
     0.449
A0A1X7SIZ1
Dynein_AAA_lid domain-containing protein.
  
     0.444
A0A1X7VDP2
Dynactin domain-containing protein.
   
 0.430
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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