Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7SL87Poly [ADP-ribose] polymerase. (72 aa)    
Predicted Functional Partners:
A0A1X7VTK5
Poly [ADP-ribose] polymerase.
    
 0.942
A0A1X7VKX8
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.909
A0A1X7U7R0
Uncharacterized protein.
    
 0.892
A0A1X7V563
Uncharacterized protein.
    
 0.892
A0A1X7VPB9
AAA domain-containing protein.
   
 0.887
A0A1X7UN12
AAA domain-containing protein.
   
  0.872
A0A1X7UQP4
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.868
A0A1X7U768
SAP domain-containing protein.
   
 
 0.865
A0A1X7VIY4
AAA domain-containing protein.
   
 0.862
A0A1X7V3L2
Uncharacterized protein.
    
 0.860
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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