STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7SLQ4Uncharacterized protein. (90 aa)    
Predicted Functional Partners:
A0A1X7VFB8
Uncharacterized protein.
   
 0.969
A0A1X7VCD1
Uncharacterized protein.
    
 0.966
A0A1X7VV22
Uncharacterized protein.
    
 0.958
A0A1X7V8X6
Uncharacterized protein.
   
 0.947
A0A1X7UE51
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.943
A0A1X7V136
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.941
A0A1X7SWW7
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.917
A0A1X7UGP4
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.917
A0A1X7T699
Uncharacterized protein.
   
 0.900
A0A1X7V411
Uncharacterized protein.
   
 0.900
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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