STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7SM77Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (75 aa)    
Predicted Functional Partners:
A0A1X7VUQ0
Uncharacterized protein; Belongs to the cullin family.
    
 0.531
A0A1X7SYR0
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
  
     0.521
A0A1X7VTC1
Uncharacterized protein.
    
 0.477
A0A1X7VVB8
RING-type domain-containing protein.
    
 0.477
A0A1X7TF28
Ubiquitin-like domain-containing protein.
    
 0.452
A0A1X7TZF5
Ubiquitin-like domain-containing protein.
    
 0.452
A0A1X7VJD6
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.444
A0A1X7VCL5
TIP120 domain-containing protein.
    
 0.433
A0A1X7TUQ8
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
  
     0.409
A0A1X7UL26
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
   
 0.400
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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