STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7SQP3Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (72 aa)    
Predicted Functional Partners:
A0A1X7VJD6
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.603
A0A1X7V519
UBX domain-containing protein.
     
 0.602
A0A1X7VUQ0
Uncharacterized protein; Belongs to the cullin family.
    
 0.569
A0A1X7TF28
Ubiquitin-like domain-containing protein.
    
 0.558
A0A1X7TZF5
Ubiquitin-like domain-containing protein.
    
 0.558
A0A1X7SDI1
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.534
A0A1X7V2A4
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.534
A0A1X7VD19
MPN domain-containing protein.
    
 0.514
A0A1X7T4C7
Cullin domain-containing protein; Belongs to the cullin family.
   
 0.511
A0A1X7VQK0
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.511
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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