STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7SVP0Uncharacterized protein. (314 aa)    
Predicted Functional Partners:
A0A1X7V0I1
Ubiquitin-like domain-containing protein.
    
  0.716
A0A1X7SP59
HECT domain-containing protein.
   
 
 0.650
A0A1X7VUP3
Uncharacterized protein.
   
 
 0.650
A0A1X7VBG1
Ubiquitin-like domain-containing protein.
   
 0.618
A0A1X7VUD5
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.570
A0A1X7VEL4
RRM domain-containing protein.
    
 
 0.493
A0A1X7TY37
Uncharacterized protein.
   
  0.448
A0A1X7U0E5
Uncharacterized protein.
   
  0.448
A0A1X7V088
Uncharacterized protein.
   
  0.448
A0A1X7V2I2
Uncharacterized protein.
   
  0.448
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.