STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7SX87Uncharacterized protein. (152 aa)    
Predicted Functional Partners:
A0A1X7TET6
Uncharacterized protein.
   
 0.960
A0A1X7UMG8
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.958
A0A1X7VTL2
Uncharacterized protein.
    
 0.955
A0A1X7UJU6
Uncharacterized protein.
    
 0.891
A0A1X7SLG1
Uncharacterized protein.
    
 0.887
A0A1X7VQI0
Uncharacterized protein.
    
 0.887
A0A1X7TAG0
Uncharacterized protein.
   
 0.850
A0A1X7VB75
Uncharacterized protein.
   
 0.850
A0A1X7VBC3
Uncharacterized protein.
   
 0.850
A0A1X7V174
Uncharacterized protein.
   
 0.804
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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