STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7SYT8Ubiquitin-like domain-containing protein. (201 aa)    
Predicted Functional Partners:
A0A1X7SJL9
DH domain-containing protein.
    
 0.926
A0A1X7T4D5
PH domain-containing protein.
    
 0.926
A0A1X7TV84
Uncharacterized protein.
   
 0.891
A0A1X7VCS5
VWFA domain-containing protein.
   
 0.891
A0A1X7VB52
Uncharacterized protein.
   
 0.839
A0A1X7V519
UBX domain-containing protein.
    
 0.805
A0A1X7V801
RPN13_C domain-containing protein.
   
 
 0.805
A0A1X7VLT0
26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family.
   
 0.759
A0A1X7V108
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.752
A0A1X7VMC3
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.744
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
Server load: low (28%) [HD]