STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7SZ54Uncharacterized protein. (137 aa)    
Predicted Functional Partners:
A0A1X7VT82
Uncharacterized protein.
   
 0.581
A0A1X7V3L2
Uncharacterized protein.
    
 0.564
A0A1X7TRD1
Uncharacterized protein.
    
 0.541
A0A1X7TXK8
Uncharacterized protein.
    
 0.541
A0A1X7UH02
Uncharacterized protein.
    
 0.541
A0A1X7V6X1
Uncharacterized protein.
    
 0.541
A0A1X7VUS5
Uncharacterized protein.
    
 0.541
A0A1X7VW18
Uncharacterized protein; Belongs to the NDK family.
   
 
 0.539
A0A1X7UK12
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.532
A0A1X7VND2
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.532
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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