STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7T092Uncharacterized protein; Belongs to the arginase family. (180 aa)    
Predicted Functional Partners:
A0A1X7VF60
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.897
A0A1X7TJC4
Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
   
 0.830
A0A1X7VEV5
Uncharacterized protein.
  
 
 0.826
A0A1X7UHL3
Histidine ammonia-lyase; Belongs to the PAL/histidase family.
  
 
 0.762
A0A1X7VS79
Histidine ammonia-lyase; Belongs to the PAL/histidase family.
  
 
 0.762
A0A1X7VGA0
Uncharacterized protein.
     
 0.743
A0A1X7VVD9
Isochorismatase domain-containing protein.
  
 
 0.732
A0A1X7UZW3
Cytochrome b5 heme-binding domain-containing protein.
   
  
 0.673
A0A1X7VP53
Uncharacterized protein.
    
 0.672
A0A1X7VQX4
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
      
 0.662
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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