STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7T1D5Uncharacterized protein. (230 aa)    
Predicted Functional Partners:
A0A1X7SZ31
Uncharacterized protein.
   
 0.957
A0A1X7VR16
Uncharacterized protein.
   
 0.957
A0A1X7VCI3
Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.
    
 0.781
A0A1X7UTZ8
Uncharacterized protein.
   
 0.780
A0A1X7VWE9
Nuclear pore protein.
   
 0.779
A0A1X7VR84
Uncharacterized protein.
   
 0.762
A0A1X7VW27
Uncharacterized protein.
    
 0.749
A0A1X7UN76
Uncharacterized protein.
    
 0.731
A0A1X7UZU8
WD_REPEATS_REGION domain-containing protein.
    
 0.731
A0A1X7V0P0
Uncharacterized protein.
    
 0.699
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.