STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7T3E5TP6A_N domain-containing protein. (246 aa)    
Predicted Functional Partners:
A0A1X7TK84
Uncharacterized protein; Belongs to the RecA family.
    
 0.760
A0A1X7T8U2
WD_REPEATS_REGION domain-containing protein.
    
 
 0.696
A0A1X7UAM7
WD_REPEATS_REGION domain-containing protein.
    
 
 0.696
A0A1X7UWV6
DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.
    
 0.691
A0A1X7VLV8
ERCC4 domain-containing protein.
    
 
 0.669
A0A1X7V7I5
Uncharacterized protein.
    
 
 0.658
A0A1X7V165
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
 0.652
A0A1X7V1F2
RECA_2 domain-containing protein.
    
 0.646
A0A1X7V5D4
Uncharacterized protein.
    
 
 0.634
A0A1X7UEW6
RECA_2 domain-containing protein.
    
 0.609
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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