STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7T699Uncharacterized protein. (166 aa)    
Predicted Functional Partners:
A0A1X7VCD1
Uncharacterized protein.
   
 0.979
A0A1X7UE51
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.975
A0A1X7VV22
Uncharacterized protein.
   
 0.975
A0A1X7V136
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
   
 0.973
A0A1X7VFB8
Uncharacterized protein.
   
 0.973
A0A1X7UZG3
Uncharacterized protein.
   
 0.970
A0A1X7TI43
Uncharacterized protein.
    
 0.969
A0A1X7UEX5
Uncharacterized protein.
   
 0.963
A0A1X7SWW7
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.923
A0A1X7UGP4
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.923
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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