A0A1X7T8G3 protein (Amphimedon queenslandica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1X7T8G3

Uncharacterized protein. (657 aa)

Predicted Functional Partners:

A0A1X7UKR6

0.626

A0A1X7T8W1

0.464

A0A1X7VC91

0.448

A0A1X7UWZ9

0.418

A0A1X7V5W1

0.418

A0A1X7SU03

0.416

A0A1X7U9G2

0.416

Your Current Organism:

Amphimedon queenslandica

NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1X7SU03	A0A1X7T8G3	Uncharacterized protein.	Uncharacterized protein.	0.416
A0A1X7SU03	A0A1X7T8W1	Uncharacterized protein.	Glyco_hydro_63 domain-containing protein.	0.416
A0A1X7SU03	A0A1X7UWZ9	Uncharacterized protein.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.929
A0A1X7SU03	A0A1X7V5W1	Uncharacterized protein.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.929
A0A1X7T8G3	A0A1X7SU03	Uncharacterized protein.	Uncharacterized protein.	0.416
A0A1X7T8G3	A0A1X7T8W1	Uncharacterized protein.	Glyco_hydro_63 domain-containing protein.	0.464
A0A1X7T8G3	A0A1X7U9G2	Uncharacterized protein.	Uncharacterized protein.	0.416
A0A1X7T8G3	A0A1X7UKR6	Uncharacterized protein.	Uncharacterized protein.	0.626
A0A1X7T8G3	A0A1X7UWZ9	Uncharacterized protein.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.418
A0A1X7T8G3	A0A1X7V5W1	Uncharacterized protein.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.418
A0A1X7T8G3	A0A1X7VC91	Uncharacterized protein.	Arf-GAP domain-containing protein.	0.448
A0A1X7T8W1	A0A1X7SU03	Glyco_hydro_63 domain-containing protein.	Uncharacterized protein.	0.416
A0A1X7T8W1	A0A1X7T8G3	Glyco_hydro_63 domain-containing protein.	Uncharacterized protein.	0.464
A0A1X7T8W1	A0A1X7U9G2	Glyco_hydro_63 domain-containing protein.	Uncharacterized protein.	0.416
A0A1X7T8W1	A0A1X7UKR6	Glyco_hydro_63 domain-containing protein.	Uncharacterized protein.	0.626
A0A1X7T8W1	A0A1X7UWZ9	Glyco_hydro_63 domain-containing protein.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.418
A0A1X7T8W1	A0A1X7V5W1	Glyco_hydro_63 domain-containing protein.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.418
A0A1X7T8W1	A0A1X7VC91	Glyco_hydro_63 domain-containing protein.	Arf-GAP domain-containing protein.	0.448
A0A1X7U9G2	A0A1X7T8G3	Uncharacterized protein.	Uncharacterized protein.	0.416
A0A1X7U9G2	A0A1X7T8W1	Uncharacterized protein.	Glyco_hydro_63 domain-containing protein.	0.416