STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7T994Chromo domain-containing protein. (215 aa)    
Predicted Functional Partners:
A0A1X7VIW2
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.463
A0A1X7V7K6
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.458
A0A1X7SWK7
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.429
A0A1X7UGR6
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.429
A0A1X7VIW7
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.429
A0A1X7UG22
Uncharacterized protein.
  
 0.425
A0A1X7UNU1
SCP2 domain-containing protein.
  
 0.418
A0A1X7V2I7
Rieske domain-containing protein.
    
 0.413
A0A1X7VNF5
TF_AP-2 domain-containing protein.
    
 0.412
A0A1X7V4U8
PKS_AT domain-containing protein.
  
 
 0.408
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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