STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7TC28AIG1-type G domain-containing protein. (307 aa)    
Predicted Functional Partners:
A0A1X7UJX9
MIF4G domain-containing protein.
   
 0.737
A0A1X7VQP6
Nuclear cap-binding protein subunit 2.
    
 0.690
A0A1X7VFP0
W2 domain-containing protein.
   
 0.674
A0A1X7UWS4
S1 motif domain-containing protein.
   
 0.647
A0A1X7SPL3
Uncharacterized protein.
   
 0.638
A0A1X7SWH1
Uncharacterized protein.
   
 0.638
A0A1X7SWW4
Uncharacterized protein.
   
 0.638
A0A1X7UXV6
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.638
A0A1X7UPZ3
Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA.
   
 0.609
A0A1X7UJW1
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.607
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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