STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7TIJ7Uncharacterized protein. (177 aa)    
Predicted Functional Partners:
A0A1X7VF19
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.989
A0A1X7VVR1
Proteasome subunit beta.
   
 0.987
A0A1X7TYU5
Proteasome subunit beta.
  
0.986
A0A1X7VQF8
Proteasome subunit beta.
   
 0.986
A0A1X7V3L7
Proteasome subunit alpha type.
   
 0.983
A0A1X7VLF0
Proteasome subunit alpha type.
   
 0.982
A0A1X7UBR2
Proteasome subunit alpha type.
   
 0.981
A0A1X7UPE1
Proteasome endopeptidase complex; Belongs to the peptidase T1A family.
   
 0.980
A0A1X7VCV0
Proteasome subunit alpha type.
   
 0.980
A0A1X7TF67
Proteasome subunit alpha type.
   
 0.979
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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