STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7TW56Uncharacterized protein. (160 aa)    
Predicted Functional Partners:
A0A1X7UXM6
Uncharacterized protein.
    
 0.874
A0A1X7VBP9
Uncharacterized protein.
    
 0.610
A0A1X7VBR6
Uncharacterized protein.
   
 0.569
A0A1X7U633
Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
   
 0.552
A0A1X7U124
CPSF_A domain-containing protein.
    
 0.495
A0A1X7SX57
Helicase ATP-binding domain-containing protein.
    
 0.489
A0A1X7UQI7
Uncharacterized protein.
    
 0.489
A0A1X7UQJ2
DSHCT domain-containing protein.
    
 0.489
A0A1X7VNW5
Tr-type G domain-containing protein.
    
 0.489
A0A1X7V5E2
Uncharacterized protein.
    
 0.488
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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