STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7TXU2Uncharacterized protein. (292 aa)    
Predicted Functional Partners:
A0A1X7V3G0
PH domain-containing protein.
   
 
 0.836
A0A1X7V3R9
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.715
A0A1X7VCA7
ARID domain-containing protein.
      
 0.552
A0A1X7VHL9
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.552
A0A1X7U0F0
Uncharacterized protein.
   
 
 0.538
A0A1X7V5G1
Uncharacterized protein.
   
 
 0.538
A0A1X7UYT6
PRA1 family protein.
    
 
 0.520
A0A1X7VE55
Uncharacterized protein.
   
 
 0.518
A0A1X7SZD1
Protein YIPF.
   
 
 0.481
A0A1X7TBC8
Protein YIPF.
   
 
 0.481
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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