STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7TZL5NTF2 domain-containing protein. (143 aa)    
Predicted Functional Partners:
A0A1X7V7I5
Uncharacterized protein.
    
 0.925
A0A1X7VAR9
Uncharacterized protein.
    
 0.738
A0A1X7UG69
Uncharacterized protein.
    
 0.736
A0A1X7UWB0
Uncharacterized protein.
   
 0.661
A0A1X7VKH6
HHH_2 domain-containing protein.
   
 0.653
A0A1X7U7L8
FA_FANCE domain-containing protein.
   
 0.611
A0A1X7VMK2
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
 0.611
A0A1X7UEE1
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.559
A0A1X7V3J4
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.559
A0A1X7US25
Uncharacterized protein.
    
 0.539
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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