STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7U1F2TPR_REGION domain-containing protein. (186 aa)    
Predicted Functional Partners:
A0A1X7U978
Fumarylacetoacetase.
   
  
 0.691
A0A1X7UBP9
Uncharacterized protein.
   
  
 0.686
A0A1X7SUN1
VOC domain-containing protein.
   
 
 0.616
A0A1X7US98
VOC domain-containing protein.
   
 
 0.585
A0A1X7UV40
GRIP domain-containing protein.
      
 0.474
A0A1X7T8F1
3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate.
   
  
 0.444
A0A1X7VMU7
VOC domain-containing protein.
   
 
 0.434
A0A1X7VLZ1
AIP3 domain-containing protein.
      
 0.410
A0A1X7V0S8
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; Converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). Belongs to the metallo-dependent hydrolases superfamily.
   
  
 0.401
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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