STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7U675Integrase catalytic domain-containing protein. (124 aa)    
Predicted Functional Partners:
A0A1X7SGX3
Uncharacterized protein.
  
     0.516
A0A1X7SSW1
Uncharacterized protein.
  
     0.514
A0A1X7SU29
Uncharacterized protein.
  
     0.494
A0A1X7VAN8
Uncharacterized protein.
  
     0.485
A0A1X7VJH8
Uncharacterized protein.
  
     0.478
A0A1X7V400
Uncharacterized protein.
  
     0.474
A0A1X7V4S0
Uncharacterized protein.
  
     0.449
A0A1X7VI81
Uncharacterized protein.
  
     0.410
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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