STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7U7W6RING-type domain-containing protein. (396 aa)    
Predicted Functional Partners:
A0A1X7VER8
OTU domain-containing protein.
   
 0.664
A0A1X7UDP0
Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
      
 0.557
A0A1X7VN38
AH domain-containing protein.
   
  
 0.554
A0A1X7TTF6
Uncharacterized protein.
    
 0.548
A0A1X7SP59
HECT domain-containing protein.
     
 0.524
A0A1X7VUP3
Uncharacterized protein.
     
 0.524
A0A1X7T5F4
UBIQUITIN_CONJUGAT_2 domain-containing protein.
  
 0.516
A0A1X7UP01
Uncharacterized protein.
   
 0.480
A0A1X7SV33
UBIQUITIN_CONJUGAT_2 domain-containing protein.
  
 0.478
A0A1X7TI88
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.478
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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