STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7U8X1Aspartate aminotransferase. (423 aa)    
Predicted Functional Partners:
A0A1X7VEE3
Aminotran_1_2 domain-containing protein.
   
 
 0.786
A0A1X7UQ18
Uncharacterized protein; Belongs to the LDH/MDH superfamily.
   
 0.781
A0A1X7V1N8
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
   
 
 0.641
A0A1X7VGA0
Uncharacterized protein.
   
 0.641
A0A1X7VR84
Uncharacterized protein.
    
 
 0.586
A0A1X7UNP6
Malate dehydrogenase.
   
 0.582
A0A1X7SUN1
VOC domain-containing protein.
  
 
 0.531
A0A1X7US98
VOC domain-containing protein.
  
 
 0.531
A0A1X7VMU7
VOC domain-containing protein.
  
 
 0.531
A0A1X7UU54
Aminotran_1_2 domain-containing protein.
  
  
0.527
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.