STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7U9X4Uncharacterized protein. (597 aa)    
Predicted Functional Partners:
A0A1X7V7K6
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.998
A0A1X7T4V3
Uncharacterized protein.
  
  
 0.891
A0A1X7TKJ6
AMP-binding domain-containing protein.
  
  
 0.891
A0A1X7U1E3
Uncharacterized protein.
  
  
 0.891
A0A1X7VLY2
UDP-glucose 6-dehydrogenase; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.668
A0A1X7SK76
Hint domain-containing protein.
   
 0.621
A0A1X7TB22
HintN domain-containing protein.
   
 0.621
A0A1X7UHL0
HintN domain-containing protein; Belongs to the multicopper oxidase family.
   
 0.621
A0A1X7UIG7
Hint domain-containing protein.
   
 0.621
A0A1X7U7I2
PEROXIDASE_4 domain-containing protein; Belongs to the peroxidase family.
     
 0.577
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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