STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7UAH4Uncharacterized protein. (646 aa)    
Predicted Functional Partners:
A0A1X7VX17
Serine/threonine-protein kinase PLK.
   
 0.513
A0A1X7UI96
Uncharacterized protein.
   
 0.504
A0A1X7U6Z2
Uncharacterized protein.
   
 0.477
A0A1X7VUX8
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
    
 0.475
A0A1X7VLR1
Gamma-tubulin complex component.
    
 
 0.460
A0A1X7T1P8
Uncharacterized protein.
   
 0.450
A0A1X7UKI6
Gamma-tubulin complex component.
    
 
 0.450
A0A1X7VHS8
Uncharacterized protein.
   
 0.440
A0A1X7UAW4
Uncharacterized protein.
   
 
 0.437
A0A1X7UAQ2
t-SNARE coiled-coil homology domain-containing protein.
    
 0.433
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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