STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7UCB2HTH_Tnp_4 domain-containing protein. (179 aa)    
Predicted Functional Partners:
A0A1X7UXM6
Uncharacterized protein.
    
 0.888
A0A1X7VBP9
Uncharacterized protein.
    
 0.552
A0A1X7ULH6
Uncharacterized protein.
    
 0.550
A0A1X7VWW9
DDE Tnp4 domain-containing protein.
  
 
  0.548
A0A1X7VCQ6
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 0.546
A0A1X7VRZ6
Uncharacterized protein.
    
 0.540
A0A1X7VBR6
Uncharacterized protein.
    
 0.532
A0A1X7TU40
RING-type domain-containing protein.
    
 0.529
A0A1X7U9K4
THAP-type domain-containing protein.
  
     0.525
A0A1X7SSC2
WD_REPEATS_REGION domain-containing protein.
    
 0.511
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
Server load: low (16%) [HD]