STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7UCT1Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (518 aa)    
Predicted Functional Partners:
A0A1X7UZY2
tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
0.960
A0A1X7V0I0
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
0.960
A0A1X7SFW1
tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.957
A0A1X7TAW7
AA_TRNA_LIGASE_II domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.957
A0A1X7TD07
ProRS-C_1 domain-containing protein.
  
 0.957
A0A1X7V462
Uncharacterized protein.
  
 0.957
A0A1X7U4P4
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
 0.908
A0A1X7U957
Uncharacterized protein.
   
 
 0.907
A0A1X7UIC1
Uncharacterized protein.
   
 
 0.907
A0A1X7TRI3
Uncharacterized protein.
  
 0.804
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
Server load: low (12%) [HD]