STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7UCW8Uncharacterized protein. (644 aa)    
Predicted Functional Partners:
A0A1X7VVD4
Uncharacterized protein.
     
 0.972
A0A1X7VH21
Enolase_C domain-containing protein.
     
 0.971
A0A1X7UNP6
Malate dehydrogenase.
  
 
 0.956
A0A1X7UQ18
Uncharacterized protein; Belongs to the LDH/MDH superfamily.
  
 
 0.953
A0A1X7V0U2
Citrate synthase; Belongs to the citrate synthase family.
   
 
 0.949
A0A1X7V0V2
ATP-citrate synthase; In the C-terminal section; belongs to the succinate/malate CoA ligase alpha subunit family.
   
 
 0.928
A0A1X7T1B9
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.918
A0A1X7V5K8
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.918
A0A1X7VT40
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.918
A0A1X7VRU1
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
     
 0.892
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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