STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7UDN2Uncharacterized protein. (314 aa)    
Predicted Functional Partners:
A0A1X7UAH0
Exonuclease domain-containing protein.
    
  0.492
A0A1X7SGB8
Uncharacterized protein.
  
     0.486
A0A1X7TY56
Uncharacterized protein.
  
     0.475
A0A1X7SKF8
Uncharacterized protein.
  
 
  0.474
A0A1X7SWD2
Uncharacterized protein.
  
     0.462
A0A1X7SH93
Uncharacterized protein.
  
     0.454
A0A1X7TNL0
Uncharacterized protein.
  
     0.454
A0A1X7SJW9
Uncharacterized protein.
  
     0.449
A0A1X7T3T2
Uncharacterized protein.
  
     0.447
A0A1X7SNY3
Uncharacterized protein.
  
     0.446
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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