STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7UF77Uncharacterized protein. (326 aa)    
Predicted Functional Partners:
A0A1X7V7I5
Uncharacterized protein.
   
 0.712
A0A1X7TCB9
Uncharacterized protein.
  
 
  0.558
A0A1X7U995
Uncharacterized protein.
  
     0.535
A0A1X7V1X9
Helicase C-terminal domain-containing protein.
  
     0.523
A0A1X7UPX1
Helicase ATP-binding domain-containing protein.
  
     0.518
A0A1X7TQK3
Uncharacterized protein.
  
     0.515
A0A1X7USC9
Helicase ATP-binding domain-containing protein.
  
 
  0.514
A0A1X7SD99
Helicase ATP-binding domain-containing protein.
  
     0.511
A0A1X7UR48
Helicase C-terminal domain-containing protein.
  
     0.462
A0A1X7TX79
Uncharacterized protein.
  
     0.456
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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