STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7UGG5Uncharacterized protein. (426 aa)    
Predicted Functional Partners:
A0A1X7TUT0
Triosephosphate isomerase.
  
 
 0.966
A0A1X7UVL6
Triosephosphate isomerase.
  
 
 0.966
A0A1X7UB24
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.932
A0A1X7SZF7
Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.
   
 
 0.908
A0A1X7V916
Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.
   
 
 0.908
A0A1X7TZX9
Glycerol-3-phosphate dehydrogenase [NAD(+)].
   
 
 0.849
A0A1X7VD37
PlsC domain-containing protein; Belongs to the GPAT/DAPAT family.
     
 0.802
A0A1X7SKK1
Uncharacterized protein.
    
 0.676
A0A1X7VLW9
Transket_pyr domain-containing protein.
  
 
 0.524
A0A1X7VIK2
Fe-ADH domain-containing protein.
     
 0.511
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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