STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7UGK9Uncharacterized protein. (281 aa)    
Predicted Functional Partners:
A0A1X7VG83
Uncharacterized protein.
   
 0.745
A0A1X7UJY2
Uncharacterized protein; Belongs to the peptidase C19 family.
   
 
 0.722
A0A1X7V196
Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
    
 0.714
A0A1X7VKX8
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
   0.709
A0A1X7UKI6
Gamma-tubulin complex component.
   
 0.623
A0A1X7VLR1
Gamma-tubulin complex component.
    
 0.618
A0A1X7VS05
Uncharacterized protein.
    
 0.618
A0A1X7VBG1
Ubiquitin-like domain-containing protein.
    
 
 0.537
A0A1X7SL85
Gamma-tubulin complex component.
    
 0.525
A0A1X7VN24
Gamma-tubulin complex component.
    
 0.525
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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