STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7UGN6WD_REPEATS_REGION domain-containing protein. (389 aa)    
Predicted Functional Partners:
A0A1X7UA74
WD_REPEATS_REGION domain-containing protein.
    
 0.963
A0A1X7U124
CPSF_A domain-containing protein.
    
 0.944
A0A1X7V2W5
Uncharacterized protein.
  
 
 
0.938
A0A1X7USW8
Uncharacterized protein.
    
 0.932
A0A1X7VUQ0
Uncharacterized protein; Belongs to the cullin family.
    
 0.906
A0A1X7SLI9
WD_REPEATS_REGION domain-containing protein.
  
  
 
0.900
A0A1X7UJW9
Uncharacterized protein.
     
  0.900
A0A1X7VDN1
Uncharacterized protein.
    
 
 0.833
A0A1X7UXM6
Uncharacterized protein.
    
 
 0.827
A0A1X7V676
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.806
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
Server load: low (14%) [HD]