STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7UHQ1Peptidase_M50 domain-containing protein. (498 aa)    
Predicted Functional Partners:
A0A1X7SUJ7
Uncharacterized protein.
  
  
 
0.900
A0A1X7VET6
Bac_surface_Ag domain-containing protein.
  
  
 0.876
A0A1X7U7G0
BHLH domain-containing protein.
    
 0.800
A0A1X7VCH4
BZIP domain-containing protein.
     
 0.795
A0A1X7UBV1
BZIP domain-containing protein.
     
 0.768
A0A1X7VQX4
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
     
 0.712
A0A1X7UPY4
BZIP domain-containing protein.
     
 0.665
A0A1X7TPY0
RRF domain-containing protein.
  
  
 0.575
A0A1X7SFI9
ATP-dependent Clp protease proteolytic subunit.
  
  
 0.533
A0A1X7SFW1
tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.520
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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