STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7UIH6F-box domain-containing protein. (496 aa)    
Predicted Functional Partners:
A0A1X7VRU7
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.902
I1FHB6_AMPQE
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.902
A0A1X7SDI1
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.804
A0A1X7V2A4
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.804
A0A1X7V339
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 
 0.770
A0A1X7VCL5
TIP120 domain-containing protein.
     
 0.668
A0A1X7U453
Uncharacterized protein.
   
 
 0.648
A0A1X7TF28
Ubiquitin-like domain-containing protein.
    
 0.627
A0A1X7TZF5
Ubiquitin-like domain-containing protein.
    
 0.627
A0A1X7STA6
Cullin domain-containing protein; Belongs to the cullin family.
    
 0.557
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.